I’m currently a graduate student at College of Biomedical Engineering, Sichuan University, advised by Prof. Jing Zhang. Prior to that, I got my bachelor’s degree in Medical Information Engineering in 2021, followed by an M.Sc. in Biomedical Engineering in 2024. I’m now working on histopathology image guided clinical tasks. Previously, I worked with Prof. Jun Cheng about unsupervised deformable medical image registration. I was born and grown up in Chongqing, a city in the southwest China, famous as the city of mountain and frog.

My research interest includes Computational Pathology and Medical Image Analysis (Segmentation, Registration, Super Resolution)

I am deeply indebted to everyone who has supported me in my academic career.

🔥 News

Events

- One paper accepted by Signal Transduction and Targeted Therapy.
- One paper accepted by Journal of Clinical Oncology.
- Our work about pathology foundation model has been accepted by Nature!
- One paper accepted by IEEE Transactions on Medical Imaging.
- One paper accepted by Remote Sensing.
- One paper accepted by Computers in Biology and Medicine.
- One paper accepted by Biomedical Signal Processing and Control.
- 🎉🎉 I passed the exam of my doctoral program.

📝 Publications

Signal Transduction and Targeted Therapy

Pancancer outcome prediction via a unified weakly supervised deep learning model

W. Yuan†, Y. J. Chen†, B. Y. Zhu, S. Yang, J. Y. Zhang, N. Mao, J. X. Xiang, Y. C. Li, Y. F. Ji, X. D. Luo, K. N. Zhang, X. H. Xing, S. Kang, D. Y. Xiao, F. Wang, J. K. Wu, H. Y. Zhang, H. P. Tang, H. Maurya, G. Corredor, C. Barrera. Y. F. Zhou, K. Pandav, J. H. Zhao, P. Jain, L. Delasos, J. Z. Huang, K. L. Yang, T. N. Teknos, J. Lewis Jr., S. Koyfman, N. A. Pennell, K. H. Yu, X. Han, J. Zhang#, X. Y. Wang#, A. Madabhushi

Journal of Clinical Oncology

Foundation Model for Predicting Prognosis and Adjuvant Therapy Benefit From Digital Pathology in GI Cancers

X. Y. Wang†, Y. M. Jiang†, S. Yang, F. Wang, X. M. Zhang, W. Yang, Y. J. Chen, X. Y. Wu, J. X. Xiang, Y. C. Li, X. F. Jiang, W. Yuan, J. Zhang, K. H. Yu, R. L. Ward, N. Hawkins, J. Jonnagaddala, G. X. Li, R. J. Li#

Nature

A Pathology Foundation Model for Cancer Diagnosis and Prognosis Prediction

X. Y. Wang†, J. H. Zhao†, E. Marostica, W. Yuan, J. T. Jin, J. Y. Zhang, R. J. Li, H. P. Tang, K. R. Wang, Y. Li, F. Wang, Y. L. Peng, J. Y. Zhu, Jing Zhang, C. R. Jackson, Jun Zhang, D. Dillon, N. U. Lin, L. Sholl, T. Denize, D. Meredith, K. L. Ligon, S. Signoretti, S. Ogino, J. A. Golden, M. P. Nasrallah, X. Han, S. Yang#, K. H. Yu#

IEEE Transactions on Medical Imaging

HiCervix: An Extensive Hierarchical Dataset and Benchmark for Cervical Cytology Classification

D. Cai†, J. Chen†, J. H. Zhao†, Y. Xue, S. Yang, W. Yuan, M. Feng, H. Y. Weng, S. G. Liu, Y. L. Peng, J. Y. Zhu, K. R. Wang, C. Jackson, H. P. Tang#, J. Z. Huang, X. Y. Wang#

Computers in Biology and Medicine

MACG-Net: Multi-axis Cross Gating Network for Deformable Medical Image Registration

W. Yuan, J. Cheng, Y. H. Gong, L. He#, J. Zhang

Remote Sensing

ESatSR: Enhancing Super-Resolution for Satellite Remote Sensing Images with State Space Model and Spatial Context Y. X. Wang†, W. Yuan†, X. Fang, B. J. Lin#
BSPC

Automatic Tooth Segmentation for Patients with Alveolar Clefts Guided by Tooth Descriptors Y. H. Gong, J. Zhang, J. Cheng, W. Yuan, L. He#

🎖 Honors and Awards

2025 Autoimmune Disease Machine Learning Challenge #1 3rd place
2023 DrivenData VisioMel Melanoma relapse prediction Challenge 5th place

📖 Educations

2024 - Ph.D student in Biomedical Engineering, Sichuan University
2021 - 2024 M.Sc. in Biomedical Engineering, Sichuan University
2017 - 2021 B.Eng. in Medical Information Engineering, Sichuan University

💬 Talks

Nov., 2022, “Textile Solid Waste Recognition with Multiple Material Features”, contributed talk at CCISP 2022. (Chengdu, China)

unique visitors since Nov. 2023

Wei Yuan